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Research Associate (m­­/­­f­­/­­x) for NGS Data Management ­­/­­ Developer for Web-Applications and Databases 17.05.2023 Technische Universität Dresden Dresden
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Research Associate (m/f/x) for NGS Data Management / Developer for Web-Applications and Databases
Aktualität: 17.05.2023


17.05.2023, Technische Universität Dresden
Research Associate (m/f/x) for NGS Data Management / Developer for Web-Applications and Databases
This position will be a challenging and exciting opportunity for candidates who are keen on working at the interface between IT development and infrastructure in science. The main part is the implementation of interfaces which link the sample management system and storage structure of DcGC to its counterpart infrastructure at GHGA. Secondly, the successful applicant will handle customer support, data access and upload requests of sequencing data to GHGA and processes data ingest, metadata validation and quality control. Both tasks will happen in close interaction with the ZIH and the relevant GHGA working groups, in particular setup necessary interfaces that link DcGC with GHGA setup a database to store and manage metadata information build and design a portal for data submission and information visualization develop data security concepts handling human data in collaboration with ZIH and TU Dresden Information Security validation of sequencing data and metadata for submission into GHGA handling data access requests and work on tasks as part of the GHGA data steward team contribute to the relevant GHGA working groups.
university degree (German Diploma, Master's degree) in computer science, data science, computational biology, bioinformatics or a related field of natural sciences experience and expertise in the development of data management / data curation willingness to familiarize yourself with an existing comprehensive software solution with a complex data structure and to help develop it further experience in the conception of web-based user interfaces/user guidance and confident handling of HTML/CSS proficiency in unix-based systems and experience in IT relevant languages/tools such as Python, Java, Groovy/Grails, MySQL (SQL + DDL), Javascript + Frameworks (JQuery, Vue.js), Tomcat, Webservices/REST, Git, Gitlab (CI/CD), Testing (JUnit, Geb) good skills in spoken and written German and English open-minded and motivated to push the tasks high motivation and the ability to work both independently and in a team. Understanding of sequencing technologies and/or data security is beneficial.